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biothings-mcp

Research and data teams in life sciences who need quick lookups of genes, variants and compounds.

  • Listedour rating
  • 35gitHub stars
  • MITlicence
  • 11 months agolast update
claude mcp add biothings-mcp -- uvx biothings-mcp
README.md

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What it does

An MCP server that lets an AI assistant query BioThings data sources. It covers gene annotation from mygene.info, variant annotation from myvariant.info, chemical compound data from mychem.info and taxonomic information. Answers come back as structured results that the assistant can use in its reply.

Use cases

  1. 01Look up annotations for a list of genes
  2. 02Check the details of a genetic variant
  3. 03Find information about a drug or chemical compound

Questions about
biothings-mcp.

What is biothings-mcp used for?

Research and data teams in life sciences who need quick lookups of genes, variants and compounds. An MCP server that lets an AI assistant query BioThings data sources. It covers gene annotation from mygene.info, variant annotation from myvariant.info, chemical compound data from mychem.info and taxonomic information. Answers come back as structured results that the assistant can use in its reply.

How do I install biothings-mcp?

Run this in your terminal: claude mcp add biothings-mcp -- uvx biothings-mcp

Is biothings-mcp open source?

Yes. The code is on GitHub (longevity-genie/biothings-mcp) under the MIT licence.

Is biothings-mcp safe to use?

Our automatic scan flagged points to review, so read the code before installing it. Third party open source software. Sabemos AI does not maintain it. Check the code and permissions before you connect it to company data.